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authorAntero Mejr <antero@mailbox.org>2022-06-17 20:55:55 +0000
committerGuix Patches Tester <>2022-06-17 21:58:20 +0100
commitf2152789152c06758696abd1181f80f8dda26a60 (patch)
tree01e91e0c4693801c39918ca6ea3388e3feba35e9
parent6fc33d91ba6b07beae8a9a38a5b768511bb79ced (diff)
downloadguix-patches-f2152789152c06758696abd1181f80f8dda26a60.tar
guix-patches-f2152789152c06758696abd1181f80f8dda26a60.tar.gz
gnu: Add simpleitk.series-12730
* gnu/packages/image-processing.scm (simpleitk): New variable.
-rw-r--r--gnu/packages/image-processing.scm41
1 files changed, 41 insertions, 0 deletions
diff --git a/gnu/packages/image-processing.scm b/gnu/packages/image-processing.scm
index 0c25b41dad..2c0141696b 100644
--- a/gnu/packages/image-processing.scm
+++ b/gnu/packages/image-processing.scm
@@ -20,6 +20,7 @@
;;; Copyright © 2021 Guillaume Le Vaillant <glv@posteo.net>
;;; Copyright © 2021 Ivan Gankevich <i.gankevich@spbu.ru>
;;; Copyright © 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com>
+;;; Copyright © 2022 Antero Mejr <antero@mailbox.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -72,6 +73,7 @@
#:use-module (gnu packages image)
#:use-module (gnu packages imagemagick)
#:use-module (gnu packages linux)
+ #:use-module (gnu packages lua)
#:use-module (gnu packages maths)
#:use-module (gnu packages pdf)
#:use-module (gnu packages perl)
@@ -84,6 +86,7 @@
#:use-module (gnu packages qt)
#:use-module (gnu packages serialization)
#:use-module (gnu packages sqlite)
+ #:use-module (gnu packages swig)
#:use-module (gnu packages tbb)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
@@ -1372,3 +1375,41 @@ segmentation.")
"Image and video labeling tool supporting different shapes like
polygons, rectangles, circles, lines, points and VOC/COCO export.")
(license license:gpl3+)))
+
+(define-public simpleitk
+ (package
+ (name "simpleitk")
+ (version "2.1.1.2")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/SimpleITK/SimpleITK")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1dgwl6pp2hw0rsr5f7xahic3whd6py3rmgg645v450c0vwih6vjj"))))
+ (build-system cmake-build-system)
+ (arguments
+ (list #:tests? #f ;fetches external test data from network
+ #:configure-flags
+ #~(list (string-append "-DITK_DIR=" #$insight-toolkit)
+ "-DBUILD_TESTING=OFF"
+ "-DBUILD_EXAMPLES=OFF"
+ "-DBUILD_SHARED_LIBS=ON")
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-after 'unpack 'fix-testing-cmake
+ (lambda _
+ (substitute* "Testing/Unit/CMakeLists.txt"
+ (("add_subdirectory\\(TestBase\\)")
+ "find_package(GTest REQUIRED)
+include_directories(${GTEST_INCLUDE_DIR})
+add_subdirectory(TestBase)")))))))
+ (native-inputs (list googletest swig))
+ (inputs (list insight-toolkit hdf5 lua))
+ (home-page "https://simpleitk.org/")
+ (synopsis "Simplified interfaces to the ITK image processing toolkit")
+ (description "SimpleITK is a simplified interface to the Insight Toolkit
+(ITK) for image registration and segmentation.")
+ (license license:asl2.0)))