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| author | Vagrant Cascadian <vagrant@reproducible-builds.org> | 2022-06-09 23:03:03 -0700 |
|---|---|---|
| committer | Vagrant Cascadian <vagrant@debian.org> | 2022-06-09 23:10:15 -0700 |
| commit | b483ef1a889ad3f3b523d6f09f810a4618fc753e (patch) | |
| tree | 24f1892559873eacfa3bfa79a2fcdcb63dc70309 | |
| parent | 7795a5dd6bb16ee5ec938ba26b91f69459639189 (diff) | |
| download | guix-patches-b483ef1a889ad3f3b523d6f09f810a4618fc753e.tar guix-patches-b483ef1a889ad3f3b523d6f09f810a4618fc753e.tar.gz | |
gnu: python-pybedtools: Update to 0.9.0.
* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.9.0.
[description]: Update to satisfy guix lint.
[license]: Update to expat and lgpl2.1+.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 13 |
1 files changed, 9 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index c53a2920ac..87df6c3515 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -830,13 +830,13 @@ servers supporting the protocol.") (define-public python-pybedtools (package (name "python-pybedtools") - (version "0.8.2") + (version "0.9.0") (source (origin (method url-fetch) (uri (pypi-uri "pybedtools" version)) (sha256 (base32 - "0wc7z8g8prgdx7n5chjva2fdq03wiwhqisjjxzkjg1j5k5ha7151")))) + "18rhzk08d3rpxhi5xh6pqg64x6v5q3daw6y3v54k85v4swncjrwj")))) (build-system python-build-system) (arguments `(#:modules ((srfi srfi-26) @@ -896,11 +896,16 @@ servers supporting the protocol.") (home-page "https://pythonhosted.org/pybedtools/") (synopsis "Python wrapper for BEDtools programs") (description - "pybedtools is a Python wrapper for Aaron Quinlan's BEDtools programs, + "This package is a Python wrapper for Aaron Quinlan's BEDtools programs, which are widely used for genomic interval manipulation or \"genome algebra\". pybedtools extends BEDTools by offering feature-level manipulations from with Python.") - (license license:gpl2+))) + ;; pypi lists GPLv2 in the PKG-INFO and website, but was relicensed in + ;; version 0.9.0 and the LICENSE.txt is consistant with the source code. + ;; + ;; pybedtools/include/gzstream.cpp and pybedtools/include/gzstream.h are + ;; licensed lgpl2.1+ + (license (list license:expat license:lgpl2.1+)))) (define-public python-biom-format (package |