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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-05-29 00:34:29 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-05-29 00:34:29 +0200 |
| commit | df3e5cfa05c45439fee30375cde21f4c3d32e26b (patch) | |
| tree | d2e480fc9acb6ee1fc0448ea83f7ea7e4d54f658 | |
| parent | b64f4a12451062d7436a0463e6c50d1cef4a75ac (diff) | |
| download | guix-patches-df3e5cfa05c45439fee30375cde21f4c3d32e26b.tar guix-patches-df3e5cfa05c45439fee30375cde21f4c3d32e26b.tar.gz | |
gnu: pigx-bsseq: Fix build.
* gnu/packages/bioinformatics.scm (pigx-bsseq)[arguments]: Patch build system
in 'autoreconf phase.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 |
1 files changed, 9 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 1b118908da..0945bddbe7 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11191,6 +11191,15 @@ in an easily configurable manner.") (modify-phases %standard-phases (add-before 'bootstrap 'autoreconf (lambda _ + ;; This was fixed in commit + ;; d56ac732524da659afbbb0972f7a87fa178ae58e, but there is no + ;; release with this fix. + (call-with-output-file "VERSION" + (lambda (port) (display ,version port))) + ;; https://github.com/BIMSBbioinfo/pigx_bsseq/issues/181 + (substitute* "m4/ax_r_package.m4" + (("if\\(is.na\\(packageDescription\\(\"PKG\"\\)\\)\\)") + "if(system.file(package=\"PKG\") == \"\")")) (invoke "autoreconf" "-vif"))) (add-before 'configure 'set-PYTHONPATH (lambda _ |