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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-04-05 18:35:14 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-04-05 18:40:48 +0200 |
| commit | df2dc0c41644477c8cc3ccc958b822f8440114ef (patch) | |
| tree | 7fb6a60840a78eaf5c16157b45816784eb9c6803 | |
| parent | e721122069528b38e9dc901c4ca69acba0df5aea (diff) | |
| download | guix-patches-df2dc0c41644477c8cc3ccc958b822f8440114ef.tar guix-patches-df2dc0c41644477c8cc3ccc958b822f8440114ef.tar.gz | |
gnu: pigx-scrnaseq: Set NUMBA_CACHE_DIR.
This is needed since the update of python-loompy.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[arguments]: Rename
'set-PYTHONPATH to 'set-additional-environment-variables and set
NUMBA_CACHE_DIR.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5ca1104436..e9778831d2 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11145,8 +11145,11 @@ methylation and segmentation.") (arguments '(#:phases (modify-phases %standard-phases - (add-before 'configure 'set-PYTHONPATH + (add-before 'configure 'set-additional-environment-variables (lambda _ + ;; Needed because of loompy + (setenv "NUMBA_CACHE_DIR" "/tmp") + ;; Needed to capture environment (setenv "PYTHONPATH" (getenv "GUIX_PYTHONPATH"))))))) (inputs (list coreutils |