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| author | Maxim Cournoyer <maxim.cournoyer@gmail.com> | 2022-04-18 17:43:43 -0400 |
|---|---|---|
| committer | Maxim Cournoyer <maxim.cournoyer@gmail.com> | 2022-05-12 12:45:55 -0400 |
| commit | 06b0512260b366513c7f3c3e8f9a6b298da968b7 (patch) | |
| tree | 49d9281c8d6d06a6f6a0633b8b180b922a944d79 | |
| parent | 1d1f44b7099a745028a4d99d623c709ab004524b (diff) | |
| download | guix-patches-06b0512260b366513c7f3c3e8f9a6b298da968b7.tar guix-patches-06b0512260b366513c7f3c3e8f9a6b298da968b7.tar.gz | |
gnu: python-pynndescent: Update to 0.5.6.
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
| -rw-r--r-- | gnu/packages/machine-learning.scm | 18 |
1 files changed, 11 insertions, 7 deletions
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index b765257d98..5f14453f01 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -1210,13 +1210,13 @@ for scientific computing and data science (e.g. BLAS and OpenMP).") (define-public python-pynndescent (package (name "python-pynndescent") - (version "0.5.5") + (version "0.5.6") (source (origin (method url-fetch) (uri (pypi-uri "pynndescent" version)) (sha256 - (base32 "10pqqqc3jkpw03cyzy04slxmpgyhqnlgbyk0c1cv7kqr5d0zhzbs")))) + (base32 "0p3jsdcprjfzz7qf5674dsqfpvdn6p4wgqikg7b6ki5abf433yv1")))) (build-system python-build-system) (arguments `(#:phases @@ -1224,12 +1224,16 @@ for scientific computing and data science (e.g. BLAS and OpenMP).") (replace 'check (lambda* (#:key inputs outputs tests? #:allow-other-keys) (when tests? - (add-installed-pythonpath inputs outputs) - (invoke "python" "-m" "pytest" "--pyargs" "pynndescent"))))))) - (native-inputs - (list python-pytest)) + (invoke "python" "-m" "pytest" "--pyargs" "pynndescent" + ;; wminkowski no longer exists in scipy 1.8.0 (see: + ;; https://github.com/lmcinnes/pynndescent/issues/177) + "-k" "not test_weighted_minkowski"))))))) + (native-inputs (list python-pytest)) (propagated-inputs - (list python-joblib python-llvmlite python-numba python-scikit-learn + (list python-joblib + python-llvmlite + python-numba + python-scikit-learn python-scipy)) (home-page "https://github.com/lmcinnes/pynndescent") (synopsis "Nearest neighbor descent for approximate nearest neighbors") |