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authorRicardo Wurmus <rekado@elephly.net>2020-08-12 11:54:09 +0200
committerRicardo Wurmus <rekado@elephly.net>2020-08-12 13:57:10 +0200
commit06d6de773baa1a167724e5519bdd2a4a3a1ca867 (patch)
treeed0ed2874a7e4d6551c8e1589da56092cb6689d1
parent2fc3021790f33e86e11ebc88099f2283dc6d530e (diff)
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gnu: Add r-gaston.
* gnu/packages/cran.scm (r-gaston): New variable.
-rw-r--r--gnu/packages/cran.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 8f888052da..e62ce5feac 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -22857,3 +22857,31 @@ and contains over 2000 functions for plotting spatial data, exploratory data
analysis, model-fitting, simulation, spatial sampling, model diagnostics, and
formal inference.")
(license license:gpl2+)))
+
+(define-public r-gaston
+ (package
+ (name "r-gaston")
+ (version "1.5.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "gaston" version))
+ (sha256
+ (base32
+ "1bx6iqfjb9lf3vn0z7v8wjv9m7issvqsnymm4qsgl3622s6qz6rg"))))
+ (properties `((upstream-name . "gaston")))
+ (build-system r-build-system)
+ (inputs `(("zlib" ,zlib)))
+ (propagated-inputs
+ `(("r-rcpp" ,r-rcpp)
+ ("r-rcppeigen" ,r-rcppeigen)
+ ("r-rcppparallel" ,r-rcppparallel)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://cran.r-project.org/web/packages/gaston/")
+ (synopsis "Genetic data handling (QC, GRM, LD, PCA) and linear mixed models")
+ (description
+ "This is a package for the manipulation of genetic data (SNPs).
+Computation of @dfn{genetic relationship matrix} (GRM) and dominance matrix,
+@dfn{linkage disequilibrium} (LD), and heritability with efficient algorithms
+for linear mixed models (AIREML).")
+ (license license:gpl3)))