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| author | Felix Gruber <felgru@posteo.net> | 2021-10-10 15:04:34 +0000 |
|---|---|---|
| committer | Ludovic Courtès <ludo@gnu.org> | 2021-10-12 18:13:29 +0200 |
| commit | 9101c7bf8eb63762b2231a31a87d830c0a6b8e52 (patch) | |
| tree | 710d6e33cc3fc8108d0e952e38a99b7b879f69c5 | |
| parent | a6c30da4dc963e8a6282773fd1c2048d856a6cb4 (diff) | |
| download | guix-patches-9101c7bf8eb63762b2231a31a87d830c0a6b8e52.tar guix-patches-9101c7bf8eb63762b2231a31a87d830c0a6b8e52.tar.gz | |
gnu: clipper: Disable non-deterministic test.
This test fails/succeeds non-deterministically.
* gnu/packages/bioinformatics.scm (clipper)[arguments]: Disable
non-deterministic test test_get_FDR_cutoff_mean.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 |
1 files changed, 8 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 082e47bf5b..7dec74f0c0 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -22,6 +22,7 @@ ;;; Copyright © 2021 Tim Howes <timhowes@lavabit.com> ;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de> ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com> +;;; Copyright © 2021 Felix Gruber <felgru@posteo.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -2363,7 +2364,13 @@ databases.") (let ((out (assoc-ref outputs "out"))) (for-each make-file-writable (find-files out "\\.gz$")) - #t)))))) + #t))) + (add-after 'unpack 'disable-nondeterministic-test + (lambda _ + ;; This test fails/succeeds non-deterministically. + (substitute* "clipper/test/test_call_peak.py" + (("test_get_FDR_cutoff_mean") "_test_get_FDR_cutoff_mean")) + #t))))) (inputs `(("htseq" ,htseq) ("python-pybedtools" ,python-pybedtools) |