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author | Roel Janssen <roel@gnu.org> | 2017-11-29 12:46:17 +0100 |
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committer | Roel Janssen <roel@gnu.org> | 2017-11-29 12:46:17 +0100 |
commit | efa6a1ddb57d8a949484ba828effab4c59374f09 (patch) | |
tree | 5720ead98505628b92203599170f265c52a2ce33 | |
parent | 94989d4baee8c7e02f7f39256be559e2d653ad4a (diff) | |
download | guix-patches-efa6a1ddb57d8a949484ba828effab4c59374f09.tar guix-patches-efa6a1ddb57d8a949484ba828effab4c59374f09.tar.gz |
gnu: Add r-copynumber.
* gnu/packages/bioinformatics.scm (r-copynumber): New variable.
-rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 833376ac21..923100b7ba 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5909,6 +5909,29 @@ data types as well.") microarrays.") (license license:artistic2.0))) +(define-public r-copynumber + (package + (name "r-copynumber") + (version "1.18.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "copynumber" version)) + (sha256 + (base32 + "01kcwzl485yjrkgyg8117b1il957ss0v6rq4bbxf4ksd5fzcjmyx")))) + (build-system r-build-system) + (propagated-inputs + `(("r-s4vectors" ,r-s4vectors) + ("r-iranges" ,r-iranges) + ("r-genomicranges" ,r-genomicranges) + ("r-biocgenerics" ,r-biocgenerics))) + (home-page "https://bioconductor.org/packages/copynumber") + (synopsis "Segmentation of single- and multi-track copy number data") + (description + "This package segments single- and multi-track copy number data by a +penalized least squares regression method.") + (license license:artistic2.0))) + (define-public r-geneplotter (package (name "r-geneplotter") |