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| author | zimoun <zimon.toutoune@gmail.com> | 2021-05-21 22:26:09 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-05-31 15:38:21 +0200 |
| commit | 0006a664155c7d556ac773b254fd09205412c172 (patch) | |
| tree | 241a86c6e68d1434afea3227db77cb09d0acd62c | |
| parent | c2a18aee16a59330a005bf6818df733a2f56c425 (diff) | |
| download | guix-patches-0006a664155c7d556ac773b254fd09205412c172.tar guix-patches-0006a664155c7d556ac773b254fd09205412c172.tar.gz | |
gnu: r-seqlogo: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-seqlogo): Move from here...
* gnu/packages/bioconductor.scm (r-seqlogo): ...to here.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 23 | ||||
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
2 files changed, 23 insertions, 23 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index c9f72c5492..b53267e80d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3652,6 +3652,29 @@ differential expression analysis, RNAseq data and related problems.") ;; Any version of the LGPL (license license:lgpl3+))) +(define-public r-seqlogo + (package + (name "r-seqlogo") + (version "1.56.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "seqLogo" version)) + (sha256 + (base32 + "02rpzjjfg5chlwwfbvv72cm78cg2vfmdwzars0cin9hz1hd7rnq1")))) + (properties `((upstream-name . "seqLogo"))) + (build-system r-build-system) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/seqLogo") + (synopsis "Sequence logos for DNA sequence alignments") + (description + "seqLogo takes the position weight matrix of a DNA sequence motif and +plots the corresponding sequence logo as introduced by Schneider and +Stephens (1990).") + (license license:lgpl2.0+))) + (define-public r-seqpattern (package (name "r-seqpattern") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8f011f0c78..832de0baad 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8023,29 +8023,6 @@ used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.") (license license:bsd-3))) -(define-public r-seqlogo - (package - (name "r-seqlogo") - (version "1.56.0") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "seqLogo" version)) - (sha256 - (base32 - "02rpzjjfg5chlwwfbvv72cm78cg2vfmdwzars0cin9hz1hd7rnq1")))) - (properties `((upstream-name . "seqLogo"))) - (build-system r-build-system) - (native-inputs - `(("r-knitr" ,r-knitr))) - (home-page "https://bioconductor.org/packages/seqLogo") - (synopsis "Sequence logos for DNA sequence alignments") - (description - "seqLogo takes the position weight matrix of a DNA sequence motif and -plots the corresponding sequence logo as introduced by Schneider and -Stephens (1990).") - (license license:lgpl2.0+))) - (define-public r-zlibbioc (package (name "r-zlibbioc") |