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author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-24 23:36:10 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-24 23:44:13 +0100 |
commit | 49a48c496f04d018f233bd5efc8b8ee11cd83cc9 (patch) | |
tree | e0ccf1daa932126cc3955a25da6f3b61c2cf3532 | |
parent | e371e534a79b491a62b9bf8e250fb504019a0a87 (diff) | |
download | guix-patches-49a48c496f04d018f233bd5efc8b8ee11cd83cc9.tar guix-patches-49a48c496f04d018f233bd5efc8b8ee11cd83cc9.tar.gz |
gnu: r-acsnminer: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-acsnminer): Move from here...
* gnu/packages/cran.scm (r-acsnminer): ...to here.
-rw-r--r-- | gnu/packages/bioinformatics.scm | 26 | ||||
-rw-r--r-- | gnu/packages/cran.scm | 26 |
2 files changed, 26 insertions, 26 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a129c48e37..807f5c87ab 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7243,32 +7243,6 @@ BLAST, KEGG, GenBank, MEDLINE and GO.") ;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+) (license (list license:ruby license:lgpl2.1+ license:gpl2+ )))) -(define-public r-acsnminer - (package - (name "r-acsnminer") - (version "0.16.8.25") - (source (origin - (method url-fetch) - (uri (cran-uri "ACSNMineR" version)) - (sha256 - (base32 - "0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l")))) - (properties `((upstream-name . "ACSNMineR"))) - (build-system r-build-system) - (propagated-inputs - `(("r-ggplot2" ,r-ggplot2) - ("r-gridextra" ,r-gridextra))) - (home-page "https://cran.r-project.org/web/packages/ACSNMineR") - (synopsis "Gene enrichment analysis") - (description - "This package provides tools to compute and represent gene set enrichment -or depletion from your data based on pre-saved maps from the @dfn{Atlas of -Cancer Signalling Networks} (ACSN) or user imported maps. The gene set -enrichment can be run with hypergeometric test or Fisher exact test, and can -use multiple corrections. Visualization of data can be done either by -barplots or heatmaps.") - (license license:gpl2+))) - (define-public r-biocinstaller (package (name "r-biocinstaller") diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index ba966fff6c..22355c3bc5 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12023,6 +12023,32 @@ statistics, with applications to @dfn{single-nucleotide polymorphism} (SNP) data.") (license license:gpl2+))) +(define-public r-acsnminer + (package + (name "r-acsnminer") + (version "0.16.8.25") + (source (origin + (method url-fetch) + (uri (cran-uri "ACSNMineR" version)) + (sha256 + (base32 + "0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l")))) + (properties `((upstream-name . "ACSNMineR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-ggplot2" ,r-ggplot2) + ("r-gridextra" ,r-gridextra))) + (home-page "https://cran.r-project.org/web/packages/ACSNMineR") + (synopsis "Gene enrichment analysis") + (description + "This package provides tools to compute and represent gene set enrichment +or depletion from your data based on pre-saved maps from the @dfn{Atlas of +Cancer Signalling Networks} (ACSN) or user imported maps. The gene set +enrichment can be run with hypergeometric test or Fisher exact test, and can +use multiple corrections. Visualization of data can be done either by +barplots or heatmaps.") + (license license:gpl2+))) + (define-public r-units (package (name "r-units") |