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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-11-23 17:22:00 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-11-24 12:13:13 +0100 |
| commit | 639bfeca2bb4026f0f65a9d418dda538055900f8 (patch) | |
| tree | c37e12c4c46b68f7d77ef8b0c3dfc97ab3047a8d | |
| parent | a61e8f949bf3f0710d1068cb880f37cf2149a1bb (diff) | |
| download | guix-patches-639bfeca2bb4026f0f65a9d418dda538055900f8.tar guix-patches-639bfeca2bb4026f0f65a9d418dda538055900f8.tar.gz | |
gnu: Add r-bsgenome-drerio-ucsc-danrer11.
* gnu/packages/bioconductor.scm (r-bsgenome-drerio-ucsc-danrer11): New variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 5d29a3acf2..97392a915d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -286,6 +286,28 @@ RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by default.") (license license:artistic2.0))) +(define-public r-bsgenome-drerio-ucsc-danrer11 + (package + (name "r-bsgenome-drerio-ucsc-danrer11") + (version "1.4.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BSgenome.Drerio.UCSC.danRer11" + version 'annotation)) + (sha256 + (base32 "08a928mqzv2jxngjcs4yr6ni1b9z9al6jdngwi438j8hm41cwk4v")))) + (properties `((upstream-name . "BSgenome.Drerio.UCSC.danRer11"))) + (build-system r-build-system) + (propagated-inputs + `(("r-bsgenome" ,r-bsgenome))) + (home-page "https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer11") + (synopsis "Full genome sequences for Danio rerio (UCSC version danRer11)") + (description + "This package provides full genome sequences for Danio rerio (Zebrafish) +as provided by UCSC (danRer11, May 2017) and stored in Biostrings objects.") + (license license:artistic2.0))) + (define-public r-bsgenome-hsapiens-1000genomes-hs37d5 (package (name "r-bsgenome-hsapiens-1000genomes-hs37d5") |