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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-12-08 13:16:54 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-12-08 14:31:54 +0100 |
| commit | 1f63c46a1caae562d1745a400956d169af090339 (patch) | |
| tree | 36352f55768d52c5b93d8b44043274686a81ffb2 | |
| parent | 1f7c06965c6b7707bb3d7ca0c2da606c11e53ee0 (diff) | |
| download | guix-patches-1f63c46a1caae562d1745a400956d169af090339.tar guix-patches-1f63c46a1caae562d1745a400956d169af090339.tar.gz | |
gnu: tbsp: Update to 1.0.0-2.dc30c03.
* gnu/packages/bioinformatics.scm (tbsp): Update to 1.0.0-2.dc30c03.
[arguments]: Relax requirement on matplot. This may turn out to be a mistake.
[inputs]: Replace python-biopython with python-biopython-1.73.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 17 |
1 files changed, 12 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 90f26be249..de15f0a135 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13946,8 +13946,8 @@ and reflect the fast5 file schema, and tools to convert between (license license:mpl2.0))) (define-public tbsp - (let ((commit "ec8fff4410cfb13a677dbbb95cbbc60217e64907") - (revision "1")) + (let ((commit "dc30c03868233c5504299c9cb0d7b2064ba9cb41") + (revision "2")) (package (name "tbsp") (version (git-version "1.0.0" revision commit)) @@ -13960,15 +13960,22 @@ and reflect the fast5 file schema, and tools to convert between (file-name (git-file-name name version)) (sha256 (base32 - "025ym14x8gbd6hb55lsinqj6f5qzw36i10klgs7ldzxxd7s39ki1")))) + "1im0bik2hxkcb7jzkcxp5nqb30hd8lfraxml6i5ik52j6z3qqln1")))) (build-system python-build-system) - (arguments '(#:tests? #f)) ; no tests included + (arguments + '(#:tests? #f ; no tests included + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'relax-requirements + (lambda _ + (substitute* "setup.py" + ((", <3.0") ""))))))) ; matplotlib (inputs `(("python-matplotlib" ,python-matplotlib) ("python-networkx" ,python-networkx) ("python-numpy" ,python-numpy) ("python-pybigwig" ,python-pybigwig) - ("python-biopython" ,python-biopython) + ("python-biopython" ,python-biopython-1.73) ("python-scikit-learn" ,python-scikit-learn) ("python-scipy" ,python-scipy))) (home-page "https://github.com/phoenixding/tbsp/") |