diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2021-04-07 21:25:06 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-04-08 03:10:06 +0200 |
| commit | 3118fde135da3c661de8d61f73ebb4f633d096ed (patch) | |
| tree | 3ad0f105fd4f8eba947ef15deb6e672f71ddeaae | |
| parent | 2ffd92abf23e3fb3b3bac3c3efd43630ba616f4b (diff) | |
| download | guix-patches-3118fde135da3c661de8d61f73ebb4f633d096ed.tar guix-patches-3118fde135da3c661de8d61f73ebb4f633d096ed.tar.gz | |
gnu: r-seurat: Update to 4.0.1.
* gnu/packages/cran.scm (r-seurat): Update to 4.0.1.
[arguments]: Remove.
[propagated-inputs]: Replace r-spatstat with r-spatstat-core and
r-spatstat-geom.
| -rw-r--r-- | gnu/packages/cran.scm | 19 |
1 files changed, 4 insertions, 15 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 044ad8f5bb..fcde611f5d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -26484,27 +26484,15 @@ other R users.") (define-public r-seurat (package (name "r-seurat") - (version "4.0.0") + (version "4.0.1") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "1mp3py00bmzj4541d8ry5sfzkpfzvnl9dpa8n4qhakd13dl30xdn")))) + "17cmp9mimvykb8ny796dn1zwmvg0pwwjw1zcixyamc5q1lwnxi3p")))) (properties `((upstream-name . "Seurat"))) (build-system r-build-system) - ;; This is needed because r-spatstat has been split up and there has - ;; been no new release of Seurat since then. - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'fix-spatstat-import - (lambda _ - (substitute* "NAMESPACE" - (("importFrom\\(spatstat,markvario\\)") - "importFrom(spatstat.core,markvario)") - (("importFrom\\(spatstat,ppp\\)") - "importFrom(spatstat.geom,ppp)"))))))) (propagated-inputs `(("r-cluster" ,r-cluster) ("r-cowplot" ,r-cowplot) @@ -26545,7 +26533,8 @@ other R users.") ("r-sctransform" ,r-sctransform) ("r-seuratobject" ,r-seuratobject) ("r-shiny" ,r-shiny) - ("r-spatstat" ,r-spatstat) + ("r-spatstat-core" ,r-spatstat-core) + ("r-spatstat-geom" ,r-spatstat-geom) ("r-tibble" ,r-tibble) ("r-uwot" ,r-uwot))) (home-page "http://www.satijalab.org/seurat") |